PEAKS - positional footprinting web server
Evolutionary Genomics Group - Research Unit on Biomedical Informatics - Barcelona Biomedical Research Park
Use this form to submit a DNA sequence dataset to positional footprinting analysis. Positional footprinting procedure allows to identify significant motif positional biases in DNA sequences. The preferential location of a motif with respect to a reference element, such as the transcription start site, can be due to functional constraints. A help window is available clicking on each parameter name. Results are returned by email. Be aware, this may take from a few minutes to a few hours.

 Dataset  upload a multi-fasta file :

reference element :
name    position 

 Motif scanning & profiling  DNA oligomers size      strand: 

Matrices      cut-off:  total    

Motif collection     cut-off: 

sliding window frame size :  

   your E-mail:       
 Web server
  Positional footprinting has been developed by Nicolás Bellora and Mar Albà, Evolutionary Genomics Group (IMIM-UPF, Barcelona).
  We acknowledge support from Ministerio de Ciencia y Tecnología and Fundación Banco Bilbao Vizcaya Argentaria.

   Data Release Policy and Software License Contact with our webmaster