Publication List

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2007

Bellora, Nicolás, Farré, Domènec, Albà, M Mar

Positional bias of general and tissue-specific regulatory motifs in mouse gene promoters. (Article)

BMC genomics, 8 pp. 459, 2007, ISSN: 1471-2164.

(Abstract | Links | BibTeX | Tags: Animals, Databases, Gene Expression Regulation, Gene Expression Regulation: genetics, Genetic, Genetic: genetics, Mice, Nucleic Acid, Organ Specificity, Organ Specificity: genetics, Promoter Regions, Software, Transcription Factors, Transcription Factors: metabolism)

Albà, M Mar, Castresana, Jose

On homology searches by protein Blast and the characterization of the age of genes. (Article)

BMC evolutionary biology, 7 pp. 53, 2007, ISSN: 1471-2148.

(Abstract | Links | BibTeX | Tags: Amino Acid, Animals, Computational Biology, Databases, Evolution, Genes, Humans, Molecular, Phylogeny, Protein, Sequence Analysis, Sequence Homology)

2006

Blanco, Enrique, Farré, Domènec, Albà, M Mar, Messeguer, Xavier, Guigó, Roderic

ABS: a database of Annotated regulatory Binding Sites from orthologous promoters. (Article)

Nucleic acids research, 34 (Database issue), pp. D63–7, 2006, ISSN: 1362-4962.

(Abstract | Links | BibTeX | Tags: Animals, Binding Sites, Chickens, Chickens: genetics, Databases, Genetic, Genomics, Humans, Internet, Mice, Nucleic Acid, Promoter Regions, Rats, Transcription Factors, Transcription Factors: metabolism, User-Computer Interface)

2004

Castresana, Jose, Guigó, Roderic, Albà, M Mar

Clustering of genes coding for DNA binding proteins in a region of atypical evolution of the human genome. (Article)

Journal of molecular evolution, 59 (1), pp. 72–9, 2004, ISSN: 0022-2844.

(Abstract | Links | BibTeX | Tags: Base Composition, Base Composition: genetics, Chromatin, Chromatin: metabolism, Chromosomes, Computational Biology, Databases, DNA-Binding Proteins, DNA-Binding Proteins: genetics, DNA-Binding Proteins: metabolism, Evolution, Genetic, Genome, human, Humans, Introns, Introns: genetics, Models, Molecular, Multigene Family, Multigene Family: genetics, Pair 19, Pair 19: genetics, Phylogeny, Zinc Fingers, Zinc Fingers: genetics)

2002

Albà, M Mar, Laskowski, Roman A, Hancock, John M

Detecting cryptically simple protein sequences using the SIMPLE algorithm. (Article)

Bioinformatics (Oxford, England), 18 (5), pp. 672–8, 2002, ISSN: 1367-4803.

(Abstract | Links | BibTeX | Tags: Algorithms, Amino Acid, Amino Acid Sequence, Amino Acid: genetics, Databases, Genetic, Genetic Variation, Internet, Minisatellite Repeats, Minisatellite Repeats: genetics, Models, Molecular Sequence Data, Protein, Protein: methods, Proteins, Proteins: chemistry, Repetitive Sequences, Saccharomyces cerevisiae, Saccharomyces cerevisiae: genetics, Sensitivity and Specificity, Sequence Analysis, Sequence Homology, Software, Statistical)